ITGB4

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:32.4 FPKM
GTEx:28.2 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA036348

 

Antibody HPA036349

 

Antibody CAB002422

 

Antibody CAB005258

 

Endothelial cells

Medium   Medium   Not available   Low  

Glandular cells

Medium   Medium   Medium   Low  

Peripheral nerve/ganglion

Medium   Low   Not available   Not available  
       
       
       

COLON - HPA RNA-seq

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Average FPKM

32.4

overview Male, age 54
Sample 1
FPKM: 39.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 44.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 40.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 43.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 27.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 17.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 14.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

28.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 21.3
Samples: 149

Max RPKM: 82.3
Min RPKM: 4.7
Std RPKM: 12.2
Median RPKM: 18.5
GTEX-147GR-2826-SM-5RQK8 82.3
GTEX-13PVQ-2726-SM-5L3H7 71.0
GTEX-145LS-2926-SM-5O99G 62.2
GTEX-ZYY3-2226-SM-5E45A 49.9
GTEX-13OVJ-1826-SM-5KM2D 49.5
GTEX-13X6K-2726-SM-5O9DG 46.8
GTEX-WFON-1326-SM-4LVMN 45.4
GTEX-148VJ-2426-SM-5NQ9Y 44.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 35.0
Samples: 196

Max RPKM: 76.1
Min RPKM: 6.3
Std RPKM: 14.5
Median RPKM: 36.3
GTEX-11TT1-1026-SM-5PNW7 76.1
GTEX-131XG-1826-SM-5LZV4 72.7
GTEX-Y5LM-1526-SM-4VDTA 72.1
GTEX-111CU-1426-SM-5GZYP 68.8
GTEX-1399S-1926-SM-5J2M5 63.6
GTEX-WFON-1426-SM-4LVMT 59.0
GTEX-UJMC-1326-SM-4IHLS 58.7
GTEX-1211K-1726-SM-5FQUJ 58.1
Show all