PSD4

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:8.7 FPKM
GTEx:2.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA034722

 

Antibody HPA034723

 

Endothelial cells

Not detected   Medium  

Glandular cells

Not detected   High  

Peripheral nerve/ganglion

Not detected   Medium  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

8.7

overview Male, age 54
Sample 1
FPKM: 7.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 11.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 10.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 8.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 9.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 4.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 9.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

2.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.4
Samples: 149

Max RPKM: 2.2
Min RPKM: 0
Std RPKM: 0.3
Median RPKM: 0.3
GTEX-13X6K-2726-SM-5O9DG 2.2
GTEX-11ONC-1926-SM-5GU75 1.8
GTEX-146FH-2426-SM-5Q5EW 1.7
GTEX-V955-1726-SM-4JBHF 1.7
GTEX-WQUQ-2626-SM-4MVNP 1.7
GTEX-Y5LM-1426-SM-5RQJL 1.7
GTEX-YEC3-2026-SM-4WWFL 1.5
GTEX-YJ8A-1726-SM-5P9IQ 1.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 5.2
Samples: 196

Max RPKM: 15.1
Min RPKM: 0.1
Std RPKM: 3.6
Median RPKM: 5.9
GTEX-1122O-1526-SM-5N9CL 15.1
GTEX-11DXX-1826-SM-5H126 12.8
GTEX-1399S-1926-SM-5J2M5 12.7
GTEX-11DXZ-1726-SM-5H12M 12.2
GTEX-13D11-0826-SM-5KLZJ 12.0
GTEX-144GM-1226-SM-5LU52 11.9
GTEX-R55D-1826-SM-48FEF 11.9
GTEX-14E6E-1526-SM-5RQIG 11.5
Show all