WDR54

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:2.9 FPKM
GTEx:4.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA043257

 

Antibody HPA053558

 

Endothelial cells

Low   Not detected  

Glandular cells

Medium   Low  

Peripheral nerve/ganglion

Medium   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

2.9

overview Male, age 54
Sample 1
FPKM: 3.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 2.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 2.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 1.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 3.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 3.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 3.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

4.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 5.3
Samples: 149

Max RPKM: 11.7
Min RPKM: 1.5
Std RPKM: 1.8
Median RPKM: 4.9
GTEX-ZAB4-2426-SM-5HL8A 11.7
GTEX-ZYY3-2226-SM-5E45A 11.3
GTEX-XV7Q-2226-SM-4BRVY 11.2
GTEX-WI4N-2226-SM-4OOS9 10.5
GTEX-1339X-1726-SM-5P9J9 9.8
GTEX-13X6K-2726-SM-5O9DG 9.6
GTEX-11P81-1426-SM-5P9JN 9.3
GTEX-13X6I-2726-SM-5Q5ET 9.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 4.2
Samples: 196

Max RPKM: 11.3
Min RPKM: 1.3
Std RPKM: 1.5
Median RPKM: 3.9
GTEX-13OVI-2026-SM-5J1MU 11.3
GTEX-ZAB4-2226-SM-5HL97 10.5
GTEX-13OVG-1426-SM-5K7VP 8.5
GTEX-145MO-2426-SM-5NQ9W 8.4
GTEX-1339X-1626-SM-5IJDN 8.2
GTEX-13O3O-2526-SM-5L3DR 8.2
GTEX-XV7Q-2126-SM-4BRVX 8.0
GTEX-147JS-2526-SM-5S2Q8 7.7
Show all