C4A

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:5.0 FPKM
GTEx:3.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA046356

 

Antibody HPA048287

 

Antibody HPA050103

 

Antibody CAB009811

 

Antibody CAB032603

 

Endothelial cells

Low   Low   Medium   Medium   Not detected  

Glandular cells

Low   Low   Medium   Not detected   Not detected  

Peripheral nerve/ganglion

Not available   Not available   Medium   Not detected   Not detected  
         
         
         

COLON - HPA RNA-seq

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Average FPKM

5.0

overview Male, age 54
Sample 1
FPKM: 4.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 5.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 2.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 1.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 15.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 2.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 4.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

3.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 5.3
Samples: 149

Max RPKM: 25.6
Min RPKM: 0
Std RPKM: 4.5
Median RPKM: 3.9
GTEX-WFG7-1626-SM-4LVMF 25.6
GTEX-132AR-2826-SM-5IJFV 22.8
GTEX-11I78-1326-SM-5PNY9 19.0
GTEX-13CF3-1326-SM-5LZXZ 16.3
GTEX-11DXZ-1626-SM-5GIDI 16.2
GTEX-11EM3-1626-SM-5N9CO 16.2
GTEX-1211K-1826-SM-5EGJ2 14.4
GTEX-14A5H-1626-SM-5SIAN 14.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 2.6
Samples: 196

Max RPKM: 15.6
Min RPKM: 0
Std RPKM: 2.7
Median RPKM: 1.8
GTEX-XAJ8-0426-SM-47JYJ 15.6
GTEX-13O3P-2326-SM-5KM55 14.7
GTEX-QDVJ-1326-SM-48U1X 14.1
GTEX-ZV6S-1226-SM-59HLH 13.1
GTEX-13O61-1626-SM-5KM3T 12.5
GTEX-QLQ7-1126-SM-4R1KN 12.0
GTEX-13CF3-1426-SM-5K7YY 10.9
GTEX-11EQ9-1426-SM-5987G 10.6
Show all