CHUK

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:10.3 FPKM
GTEx:2.7 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA001402

 

Antibody CAB004240

 

Antibody CAB018564

 

Endothelial cells

Medium   High   Medium  

Glandular cells

Medium   High   Medium  

Peripheral nerve/ganglion

Not available   High   Medium  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

10.3

overview Male, age 54
Sample 1
FPKM: 9.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 11.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 12.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 9.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 11.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 8.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 10.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

2.7

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 2.6
Samples: 149

Max RPKM: 6.2
Min RPKM: 0.6
Std RPKM: 1
Median RPKM: 2.6
GTEX-131XG-1526-SM-5GCNQ 6.2
GTEX-11WQK-2526-SM-5CVL8 5.9
GTEX-XAJ8-0726-SM-47JY5 4.9
GTEX-11I78-1326-SM-5PNY9 4.8
GTEX-ZY6K-1326-SM-5GZWP 4.4
GTEX-12WSJ-1426-SM-5GCON 4.3
GTEX-ZZ64-0826-SM-5E449 4.2
GTEX-13VXT-2026-SM-5L3EW 4.1
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 2.8
Samples: 196

Max RPKM: 5.3
Min RPKM: 1
Std RPKM: 0.7
Median RPKM: 2.8
GTEX-11TT1-1026-SM-5PNW7 5.3
GTEX-XXEK-1926-SM-4BRVD 4.9
GTEX-13CF3-1426-SM-5K7YY 4.7
GTEX-14C38-2626-SM-5RQI4 4.5
GTEX-144GM-1226-SM-5LU52 4.4
GTEX-11WQK-2126-SM-5EQME 4.3
GTEX-TKQ1-0626-SM-4DXTS 4.2
GTEX-ZV6S-1226-SM-59HLH 4.2
Show all