SMIM5

COLON - Expression summary

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RNA expression

HPA:2.2 FPKM
GTEx:9.9 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA071268

 

Endothelial cells

High  

Glandular cells

High  

Peripheral nerve/ganglion

Not available  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

2.2

overview Male, age 54
Sample 1
FPKM: 2.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 2.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 2.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 2.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 2.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 1.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 2.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

9.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 7.4
Samples: 149

Max RPKM: 35.6
Min RPKM: 1.1
Std RPKM: 4.9
Median RPKM: 5.8
GTEX-147GR-2826-SM-5RQK8 35.6
GTEX-145LS-2926-SM-5O99G 27.1
GTEX-13PVQ-2726-SM-5L3H7 21.1
GTEX-145MH-2726-SM-5QGQ6 18.8
GTEX-11DXY-2026-SM-5N9CZ 18.4
GTEX-14A5I-2426-SM-5Q5CP 16.3
GTEX-148VJ-2426-SM-5NQ9Y 15.9
GTEX-X4EO-2726-SM-4E3HS 15.9
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 12.4
Samples: 196

Max RPKM: 53
Min RPKM: 1.1
Std RPKM: 9.5
Median RPKM: 10
GTEX-1122O-1526-SM-5N9CL 53.0
GTEX-11DXX-1826-SM-5H126 49.5
GTEX-111CU-1426-SM-5GZYP 44.6
GTEX-UJHI-1126-SM-4IHLN 41.4
GTEX-PWCY-1026-SM-48TD4 39.7
GTEX-Y5LM-1526-SM-4VDTA 38.8
GTEX-ZVT2-1926-SM-5GU5T 36.0
GTEX-13D11-0826-SM-5KLZJ 35.9
Show all