NF1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:7.4 FPKM
GTEx:3.3 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA045502

 

Antibody CAB004786

 

Endothelial cells

Low   Low  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Not detected   Low  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

7.4

overview Male, age 54
Sample 1
FPKM: 6.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 9.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 9.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 7.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 6.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 4.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 7.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

3.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 3.4
Samples: 149

Max RPKM: 5.6
Min RPKM: 2
Std RPKM: 0.5
Median RPKM: 3.4
GTEX-14E6C-2226-SM-5QGQG 5.6
GTEX-148VJ-2426-SM-5NQ9Y 5.3
GTEX-131XG-1526-SM-5GCNQ 5.1
GTEX-13SLW-2826-SM-5Q5ES 4.6
GTEX-145LS-2926-SM-5O99G 4.6
GTEX-11PRG-2026-SM-5GU5F 4.4
GTEX-12WSG-2426-SM-5EQLZ 4.4
GTEX-145ME-1126-SM-5SIAT 4.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 3.2
Samples: 196

Max RPKM: 5
Min RPKM: 1.6
Std RPKM: 0.6
Median RPKM: 3.2
GTEX-148VJ-2626-SM-5QGPI 5.0
GTEX-11P82-1026-SM-5BC5J 4.9
GTEX-13O3O-2526-SM-5L3DR 4.8
GTEX-12ZZZ-2426-SM-5GCNN 4.5
GTEX-13OVJ-1726-SM-5IJDZ 4.4
GTEX-XXEK-1926-SM-4BRVD 4.4
GTEX-111VG-2226-SM-5N9DU 4.3
GTEX-11TUW-2026-SM-5EQL8 4.3
Show all