CIDEC

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:6.8 FPKM
GTEx:8.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA018837

 

Antibody HPA020553

 

Endothelial cells

Not detected   High  

Glandular cells

Medium   High  

Peripheral nerve/ganglion

Not available   High  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

6.8

overview Male, age 54
Sample 1
FPKM: 2.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 5.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 9.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 3.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 9.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 14.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 3.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

8.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 4.3
Samples: 149

Max RPKM: 42.5
Min RPKM: 0
Std RPKM: 6.8
Median RPKM: 1.7
GTEX-ZTSS-1226-SM-51MSZ 42.5
GTEX-11TT1-0926-SM-5GU5M 39.2
GTEX-1399U-2226-SM-5KLZI 30.6
GTEX-ZT9W-1726-SM-51MS3 28.2
GTEX-YEC3-2026-SM-4WWFL 24.6
GTEX-14E6E-1726-SM-5S2R6 23.8
GTEX-ZXES-1726-SM-5E43G 21.0
GTEX-117YX-0526-SM-5EGJH 19.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 12.0
Samples: 196

Max RPKM: 471.2
Min RPKM: 0.2
Std RPKM: 36.5
Median RPKM: 4.9
GTEX-13W3W-2126-SM-5K7UX 471.2
GTEX-ZXES-1626-SM-5NQ7L 131.1
GTEX-13OVG-1426-SM-5K7VP 110.8
GTEX-14E6E-1526-SM-5RQIG 90.3
GTEX-12WSJ-1526-SM-5GCNI 79.1
GTEX-1122O-1526-SM-5N9CL 47.8
GTEX-O5YT-1426-SM-3MJHC 35.9
GTEX-Y5LM-1526-SM-4VDTA 33.1
Show all