RXRA

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:6.3 FPKM
GTEx:9.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody CAB004565

 

Antibody CAB005352

 

Endothelial cells

High   Medium  

Glandular cells

High   High  

Peripheral nerve/ganglion

Not available   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

6.3

overview Male, age 54
Sample 1
FPKM: 7.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 10.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 9.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 5.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 9.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 0.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 0.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

9.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 9.7
Samples: 149

Max RPKM: 16
Min RPKM: 4.8
Std RPKM: 2.3
Median RPKM: 9.5
GTEX-117YX-0526-SM-5EGJH 16.0
GTEX-1399U-2226-SM-5KLZI 15.9
GTEX-ZLFU-1426-SM-4WWEU 14.6
GTEX-131XG-1526-SM-5GCNQ 14.4
GTEX-Y9LG-1326-SM-4VBQB 14.2
GTEX-139T6-1426-SM-5P9J7 14.1
GTEX-ZLV1-1326-SM-4WWER 14.0
GTEX-14BMU-1326-SM-5RQIH 13.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 10.1
Samples: 196

Max RPKM: 19.3
Min RPKM: 4.6
Std RPKM: 2
Median RPKM: 10.1
GTEX-13W3W-2126-SM-5K7UX 19.3
GTEX-X5EB-0926-SM-46MVT 15.9
GTEX-V955-1626-SM-4JBHJ 14.5
GTEX-TKQ2-1326-SM-4DXT9 14.0
GTEX-131XG-1826-SM-5LZV4 13.6
GTEX-132AR-2726-SM-5PNVN 13.5
GTEX-RWS6-1826-SM-47JXX 13.5
GTEX-11P7K-1526-SM-5EGI7 13.4
Show all