CIITA

COLON - Expression summary

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RNA expression

HPA:3.4 FPKM
GTEx:1.6 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody CAB016084

 

Endothelial cells

Medium  

Glandular cells

Medium  

Peripheral nerve/ganglion

Not detected  
 
 

COLON - HPA RNA-seq

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Average FPKM

3.4

overview Male, age 54
Sample 1
FPKM: 2.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 4.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 1.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 1.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 6.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 2.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 5.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

1.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 1.4
Samples: 149

Max RPKM: 8.5
Min RPKM: 0.1
Std RPKM: 1
Median RPKM: 1.1
GTEX-147GR-2826-SM-5RQK8 8.5
GTEX-13SLW-2826-SM-5Q5ES 5.6
GTEX-ZAB4-2426-SM-5HL8A 4.5
GTEX-13FHO-2726-SM-5K7VG 4.0
GTEX-11ONC-1926-SM-5GU75 3.8
GTEX-ZAJG-2626-SM-5S2NU 3.8
GTEX-13X6K-2726-SM-5O9DG 3.6
GTEX-11PRG-2026-SM-5GU5F 3.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 1.8
Samples: 196

Max RPKM: 6
Min RPKM: 0.1
Std RPKM: 1.1
Median RPKM: 1.4
GTEX-147JS-2526-SM-5S2Q8 6.0
GTEX-R53T-1326-SM-48FCQ 6.0
GTEX-P78B-1726-SM-3P5ZV 4.9
GTEX-WHWD-1226-SM-4OOS1 4.9
GTEX-11NSD-1626-SM-5986U 4.8
GTEX-Q2AH-1226-SM-48TZL 4.5
GTEX-OXRK-1726-SM-3NB16 4.4
GTEX-12KS4-2426-SM-5LU8P 4.3
Show all