NFIA

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:6.4 FPKM
GTEx:4.5 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:High
Keratinocytes:High
Langerhans:Medium
Melanocytes:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA006111

 

Antibody HPA008884

 

Fibroblasts

Medium   High  

Keratinocytes

High   Medium  

Langerhans

High   Medium  

Melanocytes

Not detected   Medium  
   
   
   

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:High
 
 
 
 

Antibody staining

Antibody HPA006111

 

Antibody HPA008884

 

Epidermal cells

High   Medium  
      
      
      
   
   
   

SKIN - HPA RNA-seq

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Average FPKM

6.4

overview Female, age 34
Sample 1
FPKM: 7.8
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 6.9
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 4.6

SKIN - GTEx RNA-seq

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Average RPKM

4.5

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 4.3
Samples: 250

Max RPKM: 8.7
Min RPKM: 2.2
Std RPKM: 1
Median RPKM: 4.2
GTEX-YB5K-2026-SM-4VDT3 8.7
GTEX-ZU9S-1826-SM-5NQ9E 7.9
GTEX-ZVTK-0226-SM-51MRG 7.0
GTEX-12WSL-2026-SM-5GCML 6.4
GTEX-WYVS-1626-SM-3NM9R 6.4
GTEX-11UD2-2526-SM-5CVNU 6.3
GTEX-145ME-1726-SM-5Q5EU 6.3
GTEX-WYBS-0626-SM-3NMAS 6.3
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 4.8
Samples: 357

Max RPKM: 9.1
Min RPKM: 2.2
Std RPKM: 1.1
Median RPKM: 4.7
GTEX-ZZPT-0226-SM-5E43X 9.1
GTEX-V1D1-2226-SM-3NMAX 8.1
GTEX-OXRP-0126-SM-3NB32 7.9
GTEX-139T4-0226-SM-5HL5S 7.8
GTEX-13NZA-0226-SM-5K7Z7 7.5
GTEX-14A6H-0126-SM-5QGPK 7.5
GTEX-QDT8-0126-SM-48TZ1 7.5
GTEX-OXRL-0126-SM-2YUMP 7.4
Show all