OBSCN

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:1.0 FPKM
GTEx:1.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA019497

 

Antibody HPA021186

 

Endothelial cells

Medium   Not detected  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Not available   Medium  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

1.0

overview Male, age 54
Sample 1
FPKM: 1.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 1.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 1.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 1.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 0.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 0.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

1.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 1.9
Samples: 149

Max RPKM: 5.4
Min RPKM: 0.4
Std RPKM: 0.8
Median RPKM: 1.8
GTEX-14A5I-2426-SM-5Q5CP 5.4
GTEX-13OW8-2726-SM-5L3FZ 4.7
GTEX-ZAJG-2626-SM-5S2NU 4.7
GTEX-13PL7-2426-SM-5J2N3 3.8
GTEX-145MH-2726-SM-5QGQ6 3.8
GTEX-XUW1-1826-SM-4BOQD 3.8
GTEX-13OW5-2826-SM-5KM1G 3.7
GTEX-11ONC-1926-SM-5GU75 3.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 1.7
Samples: 196

Max RPKM: 6.8
Min RPKM: 0.3
Std RPKM: 0.9
Median RPKM: 1.5
GTEX-X5EB-0926-SM-46MVT 6.8
GTEX-147JS-2526-SM-5S2Q8 5.9
GTEX-145MO-2426-SM-5NQ9W 5.0
GTEX-11O72-2226-SM-5PNW2 4.6
GTEX-111VG-2226-SM-5N9DU 4.5
GTEX-11WQK-2126-SM-5EQME 4.3
GTEX-YEC4-1926-SM-5IFHJ 4.1
GTEX-11TTK-2426-SM-5PNYO 3.7
Show all