ABRACL

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:69.5 FPKM
GTEx:15.2 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA030217

 

Endothelial cells

Low  

Glandular cells

High  

Peripheral nerve/ganglion

Low  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

69.5

overview Male, age 54
Sample 1
FPKM: 61.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 74.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 76.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 103.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 62.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 50.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 58.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

15.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 4.3
Samples: 149

Max RPKM: 10.9
Min RPKM: 1.1
Std RPKM: 1.6
Median RPKM: 4.1
GTEX-146FH-2426-SM-5Q5EW 10.9
GTEX-WQUQ-2626-SM-4MVNP 9.6
GTEX-11TT1-0926-SM-5GU5M 8.9
GTEX-13X6I-2726-SM-5Q5ET 8.7
GTEX-V955-1726-SM-4JBHF 8.4
GTEX-YJ8A-1726-SM-5P9IQ 7.8
GTEX-YEC3-2026-SM-4WWFL 7.5
GTEX-XAJ8-0726-SM-47JY5 7.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 26.1
Samples: 196

Max RPKM: 76.7
Min RPKM: 1.6
Std RPKM: 18.1
Median RPKM: 25.7
GTEX-11P82-1026-SM-5BC5J 76.7
GTEX-14E6E-1526-SM-5RQIG 76.3
GTEX-1399R-2226-SM-5P9JB 73.0
GTEX-ZF2S-1926-SM-4WWAN 61.4
GTEX-132AR-2726-SM-5PNVN 60.0
GTEX-Y5LM-1526-SM-4VDTA 57.6
GTEX-145MN-1726-SM-5SIA6 57.5
GTEX-ZV7C-1526-SM-5NQ72 57.0
Show all