PHIP

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:6.3 FPKM
GTEx:5.3 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA019140

 

Antibody HPA019838

 

Endothelial cells

Medium   Medium  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Medium   Medium  
   
   
   

COLON - HPA RNA-seq

? »

Average FPKM

6.3

overview Male, age 54
Sample 1
FPKM: 6.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 8.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 6.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 5.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 7.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 4.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 5.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

5.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 5.9
Samples: 149

Max RPKM: 10.9
Min RPKM: 2.4
Std RPKM: 1.3
Median RPKM: 5.8
GTEX-148VJ-2426-SM-5NQ9Y 10.9
GTEX-14E6C-2226-SM-5QGQG 10.9
GTEX-11WQK-2526-SM-5CVL8 9.9
GTEX-13SLW-2826-SM-5Q5ES 8.9
GTEX-13VXT-2026-SM-5L3EW 8.5
GTEX-13111-1926-SM-5GCOL 8.4
GTEX-145LS-2926-SM-5O99G 8.3
GTEX-145ME-1126-SM-5SIAT 8.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 4.7
Samples: 196

Max RPKM: 9.9
Min RPKM: 1.6
Std RPKM: 1.4
Median RPKM: 4.4
GTEX-11P81-1126-SM-5GU5G 9.9
GTEX-148VJ-2626-SM-5QGPI 9.0
GTEX-12KS4-2426-SM-5LU8P 8.9
GTEX-U3ZH-1326-SM-4DXSF 8.4
GTEX-13O3P-2326-SM-5KM55 8.0
GTEX-111YS-1626-SM-5GZZ9 7.8
GTEX-ZYFC-2626-SM-5NQ6S 7.5
GTEX-11ONC-2026-SM-5HL61 7.4
Show all