ABI2

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:7.0 FPKM
GTEx:4.2 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA070567

 

Endothelial cells

Not detected  

Glandular cells

Low  

Peripheral nerve/ganglion

Low  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

7.0

overview Male, age 54
Sample 1
FPKM: 6.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 7.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 4.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 4.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 8.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 11.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 6.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

4.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 5.1
Samples: 149

Max RPKM: 9
Min RPKM: 2.1
Std RPKM: 1.2
Median RPKM: 5.1
GTEX-11WQK-2526-SM-5CVL8 9.0
GTEX-YJ8A-1726-SM-5P9IQ 8.2
GTEX-139T6-1426-SM-5P9J7 7.7
GTEX-11P7K-1826-SM-5HL5A 7.2
GTEX-12BJ1-2026-SM-5FQUH 7.2
GTEX-132AR-2826-SM-5IJFV 7.1
GTEX-145ME-1126-SM-5SIAT 7.1
GTEX-14C5O-2626-SM-5RQI5 7.1
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 3.3
Samples: 196

Max RPKM: 8.2
Min RPKM: 0.5
Std RPKM: 1.8
Median RPKM: 2.8
GTEX-T6MO-0826-SM-4DM51 8.2
GTEX-XXEK-1926-SM-4BRVD 8.2
GTEX-ZYVF-2826-SM-5GIDK 7.8
GTEX-13O3P-2326-SM-5KM55 7.6
GTEX-111YS-1626-SM-5GZZ9 7.4
GTEX-11WQK-2126-SM-5EQME 7.3
GTEX-TKQ1-0626-SM-4DXTS 7.3
GTEX-ZV6S-1226-SM-59HLH 7.3
Show all