ATIC

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:15.2 FPKM
GTEx:13.4 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Not detected
Keratinocytes:Low
Langerhans:Not detected
Melanocytes:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA021012

 

Antibody CAB013462

 

Fibroblasts

Medium   Not detected  

Keratinocytes

Medium   Low  

Langerhans

Not detected   Not detected  

Melanocytes

Medium   Medium  
   
   
   

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:High
 
 
 
 

Antibody staining

Antibody HPA021012

 

Antibody CAB013462

 

Epidermal cells

Medium   High  
      
      
      
   
   
   

SKIN - HPA RNA-seq

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Average FPKM

15.2

overview Female, age 34
Sample 1
FPKM: 19.9
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 14.8
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 10.9

SKIN - GTEx RNA-seq

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Average RPKM

13.4

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 12.9
Samples: 250

Max RPKM: 27.5
Min RPKM: 6.7
Std RPKM: 3.5
Median RPKM: 12.2
GTEX-ZYWO-2226-SM-5GZXR 27.5
GTEX-W5X1-2526-SM-3GILC 25.9
GTEX-13G51-1826-SM-5KLZH 24.5
GTEX-14C38-0726-SM-5SI6M 23.8
GTEX-12WSB-2926-SM-59HKL 22.6
GTEX-XK95-0226-SM-4AT58 21.5
GTEX-11WQK-1026-SM-5EQLX 21.1
GTEX-12WSD-0626-SM-5GCMW 21.0
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 13.9
Samples: 357

Max RPKM: 27.7
Min RPKM: 5.6
Std RPKM: 3.2
Median RPKM: 13.4
GTEX-OOBK-0126-SM-2YUND 27.7
GTEX-13G51-2526-SM-5LZYK 27.6
GTEX-O5YT-0126-SM-48TBW 25.7
GTEX-148VI-1626-SM-5SI6E 24.1
GTEX-14E6E-1826-SM-5S2R7 23.9
GTEX-PVOW-0126-SM-2XCFA 22.9
GTEX-NPJ8-0126-SM-2YUNR 22.8
GTEX-S7SE-0126-SM-2XCD5 22.2
Show all