HMGA1

COLON - Expression summary

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RNA expression

HPA:50.4 FPKM
GTEx:22.5 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody CAB032200

 

Endothelial cells

Low  

Glandular cells

Not detected  

Peripheral nerve/ganglion

Low  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

50.4

overview Male, age 54
Sample 1
FPKM: 32.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 49.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 64.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 37.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 51.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 49.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 67.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

22.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 8.2
Samples: 149

Max RPKM: 31.4
Min RPKM: 3
Std RPKM: 3.9
Median RPKM: 7.3
GTEX-YJ8A-1726-SM-5P9IQ 31.4
GTEX-11TT1-0926-SM-5GU5M 22.1
GTEX-14C39-1626-SM-5S2P4 22.1
GTEX-WQUQ-2626-SM-4MVNP 20.8
GTEX-11WQK-2526-SM-5CVL8 19.8
GTEX-XBED-1726-SM-47JYO 16.4
GTEX-ZTTD-2626-SM-57WEX 16.4
GTEX-14C5O-2626-SM-5RQI5 16.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 36.9
Samples: 196

Max RPKM: 179.9
Min RPKM: 3.4
Std RPKM: 26
Median RPKM: 34.2
GTEX-11TT1-1026-SM-5PNW7 179.9
GTEX-117YW-1826-SM-5PNY5 154.4
GTEX-14C38-2626-SM-5RQI4 124.0
GTEX-146FQ-1926-SM-5NQBY 94.8
GTEX-QDVN-1326-SM-48TZ3 94.1
GTEX-144GN-1126-SM-5LU33 87.7
GTEX-PWOO-1326-SM-48TCJ 83.7
GTEX-1399R-2226-SM-5P9JB 81.2
Show all