ACLY

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:29.4 FPKM
GTEx:18.6 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA022434

 

Antibody HPA022953

 

Antibody HPA022959

 

Antibody HPA028758

 

Antibody CAB007783

 

Endothelial cells

Medium   Low   Not detected   Medium   Medium  

Glandular cells

Medium   Medium   Low   Medium   High  

Peripheral nerve/ganglion

Medium   Medium   Medium   Medium   Medium  
         
         
         

COLON - HPA RNA-seq

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Average FPKM

29.4

overview Male, age 54
Sample 1
FPKM: 42.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 28.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 33.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 17.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 26.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 26.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 30.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

18.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 16.5
Samples: 149

Max RPKM: 41.3
Min RPKM: 8.6
Std RPKM: 4.4
Median RPKM: 16.4
GTEX-11TT1-0926-SM-5GU5M 41.3
GTEX-XAJ8-0726-SM-47JY5 30.3
GTEX-131XG-1526-SM-5GCNQ 28.9
GTEX-YJ8A-1726-SM-5P9IQ 25.3
GTEX-11WQK-2526-SM-5CVL8 25.2
GTEX-11DXX-1926-SM-5EGJK 24.6
GTEX-XBED-1726-SM-47JYO 24.0
GTEX-YEC3-2026-SM-4WWFL 23.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 20.7
Samples: 196

Max RPKM: 144.8
Min RPKM: 11.7
Std RPKM: 10.9
Median RPKM: 19
GTEX-13W3W-2126-SM-5K7UX 144.8
GTEX-144GN-1126-SM-5LU33 61.1
GTEX-QDVN-1326-SM-48TZ3 52.1
GTEX-131XG-1826-SM-5LZV4 45.1
GTEX-11TT1-1026-SM-5PNW7 44.0
GTEX-PWOO-1326-SM-48TCJ 37.1
GTEX-O5YT-1426-SM-3MJHC 36.1
GTEX-XAJ8-0426-SM-47JYJ 32.6
Show all