LRMP

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:7.4 FPKM
GTEx:1.4 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA002967

 

Antibody HPA018505

 

Endothelial cells

Not detected   Not detected  

Glandular cells

Not detected   Low  

Peripheral nerve/ganglion

Not available   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

7.4

overview Male, age 54
Sample 1
FPKM: 2.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 9.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 6.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 4.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 9.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 3.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 15.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

1.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.6
Samples: 149

Max RPKM: 5.1
Min RPKM: 0
Std RPKM: 0.5
Median RPKM: 0.4
GTEX-13X6I-2726-SM-5Q5ET 5.1
GTEX-ZAB4-2426-SM-5HL8A 2.3
GTEX-13SLW-2826-SM-5Q5ES 2.1
GTEX-13X6K-2726-SM-5O9DG 1.9
GTEX-11PRG-2026-SM-5GU5F 1.8
GTEX-1477Z-2126-SM-5Q5CM 1.7
GTEX-WQUQ-2626-SM-4MVNP 1.4
GTEX-YJ8A-1726-SM-5P9IQ 1.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 2.3
Samples: 196

Max RPKM: 8.3
Min RPKM: 0
Std RPKM: 1.5
Median RPKM: 2.1
GTEX-WHWD-1226-SM-4OOS1 8.3
GTEX-145LT-0926-SM-5LU9C 6.2
GTEX-R53T-1326-SM-48FCQ 6.1
GTEX-Y9LG-1526-SM-4WWDR 5.9
GTEX-11EM3-1526-SM-5A5KN 5.6
GTEX-11NSD-1626-SM-5986U 5.6
GTEX-ZPIC-2226-SM-57WDX 5.5
GTEX-12C56-0626-SM-5EGGC 5.2
Show all