ARID1A

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:14.7 FPKM
GTEx:13.6 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Low
Keratinocytes:High
Langerhans:Medium
Melanocytes:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA005456

 

Antibody CAB016334

 

Fibroblasts

Not detected   Medium  

Keratinocytes

High   High  

Langerhans

Medium   Medium  

Melanocytes

Medium   Medium  
   
   

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Medium
 
 
 

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA005456

 

Antibody CAB016334

 

Epidermal cells

Medium   High  
      
      
      
   
   

SKIN - HPA RNA-seq

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Average FPKM

14.7

overview Female, age 34
Sample 1
FPKM: 14.5
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 15.3
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 14.2

SKIN - GTEx RNA-seq

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Average RPKM

13.6

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 13.5
Samples: 250

Max RPKM: 22.9
Min RPKM: 6.4
Std RPKM: 2.6
Median RPKM: 13.5
GTEX-11WQC-1826-SM-5GU59 22.9
GTEX-11P82-1426-SM-5BC5L 20.0
GTEX-13OW5-2326-SM-5L3HO 19.9
GTEX-13OW6-2726-SM-5J2OE 19.6
GTEX-X585-2426-SM-46MW2 19.6
GTEX-11GS4-0226-SM-5HL77 18.6
GTEX-139D8-1126-SM-5LU8W 18.6
GTEX-13G51-1826-SM-5KLZH 18.4
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 13.6
Samples: 357

Max RPKM: 22.9
Min RPKM: 5.2
Std RPKM: 2.5
Median RPKM: 13.3
GTEX-ZTX8-1426-SM-5DUVO 22.9
GTEX-11DXZ-2326-SM-5EGGV 22.2
GTEX-ZF2S-2326-SM-4WWCE 20.7
GTEX-Y5V5-2326-SM-4V6GA 19.5
GTEX-12WSC-0126-SM-5EQ4P 19.2
GTEX-13FXS-0226-SM-5IJCK 19.2
GTEX-13OW5-0126-SM-5MR3A 19.2
GTEX-11P81-2326-SM-59875 19.0
Show all