SRF

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:15.6 FPKM
GTEx:50.3 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:High
Glandular cells:Low
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA001819

 

Antibody CAB005416

 

Endothelial cells

Medium   High  

Glandular cells

Not detected   Medium  

Peripheral nerve/ganglion

Low   Medium  
   
   
   

COLON - HPA RNA-seq

? »

Average FPKM

15.6

overview Male, age 54
Sample 1
FPKM: 12.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 11.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 11.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 11.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 12.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 39.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 9.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

50.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 66.9
Samples: 149

Max RPKM: 100.6
Min RPKM: 35.2
Std RPKM: 11.1
Median RPKM: 67.5
GTEX-XAJ8-0726-SM-47JY5 100.6
GTEX-12WSM-1426-SM-5GCPA 91.4
GTEX-ZPU1-1726-SM-4WWFV 90.0
GTEX-ZDTS-2726-SM-5L3E2 88.0
GTEX-ZTTD-2626-SM-57WEX 87.5
GTEX-11ZTT-1626-SM-5EQKR 86.7
GTEX-13FTW-2126-SM-5K7YG 86.4
GTEX-WFG7-1626-SM-4LVMF 84.9
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 33.8
Samples: 196

Max RPKM: 91.9
Min RPKM: 7.1
Std RPKM: 21
Median RPKM: 26.4
GTEX-13FH7-1526-SM-5J2N6 91.9
GTEX-XAJ8-0426-SM-47JYJ 87.4
GTEX-WEY5-1426-SM-4LMJ3 85.7
GTEX-X5EB-0926-SM-46MVT 80.7
GTEX-11TUW-2026-SM-5EQL8 79.4
GTEX-11GSP-1626-SM-5986N 79.2
GTEX-TKQ1-0626-SM-4DXTS 77.7
GTEX-SNMC-1126-SM-4DM5M 76.1
Show all