GARS

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:28.6 FPKM
GTEx:21.2 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA017896

 

Antibody HPA019097

 

Endothelial cells

Medium   Low  

Glandular cells

High   Medium  

Peripheral nerve/ganglion

Not available   Medium  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

28.6

overview Male, age 54
Sample 1
FPKM: 26.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 24.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 34.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 15.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 29.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 34.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 36.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

21.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 20.0
Samples: 149

Max RPKM: 58.3
Min RPKM: 11.7
Std RPKM: 6.8
Median RPKM: 18.1
GTEX-13O1R-2426-SM-5KLZZ 58.3
GTEX-11WQK-2526-SM-5CVL8 57.3
GTEX-11TT1-0926-SM-5GU5M 56.3
GTEX-ZTTD-2626-SM-57WEX 34.4
GTEX-11I78-1326-SM-5PNY9 33.1
GTEX-YJ8A-1726-SM-5P9IQ 32.6
GTEX-14C39-1626-SM-5S2P4 31.7
GTEX-XAJ8-0726-SM-47JY5 30.8
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 22.5
Samples: 196

Max RPKM: 96.7
Min RPKM: 11.3
Std RPKM: 10.2
Median RPKM: 19.3
GTEX-11TT1-1026-SM-5PNW7 96.7
GTEX-PWOO-1326-SM-48TCJ 67.8
GTEX-XYKS-2226-SM-4E3IU 54.3
GTEX-XAJ8-0426-SM-47JYJ 51.1
GTEX-11WQK-2126-SM-5EQME 50.4
GTEX-QMRM-1226-SM-447C6 49.2
GTEX-O5YT-1426-SM-3MJHC 46.4
GTEX-131XG-1826-SM-5LZV4 43.5
Show all