TWISTNB

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:6.2 FPKM
GTEx:4.5 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA019071

 

Antibody HPA022416

 

Endothelial cells

Medium   Medium  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Medium   Not available  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

6.2

overview Male, age 54
Sample 1
FPKM: 4.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 6.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 7.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 5.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 7.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 6.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 7.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

4.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 5.0
Samples: 149

Max RPKM: 10
Min RPKM: 2.5
Std RPKM: 1.3
Median RPKM: 4.9
GTEX-11EM3-1626-SM-5N9CO 10.0
GTEX-Y9LG-1326-SM-4VBQB 8.4
GTEX-13111-1926-SM-5GCOL 8.2
GTEX-Y114-1626-SM-4TT7I 8.2
GTEX-ZPIC-2626-SM-57WE2 7.8
GTEX-11WQK-2526-SM-5CVL8 7.6
GTEX-11TT1-0926-SM-5GU5M 7.5
GTEX-ZA64-1426-SM-5CVMC 7.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 4.1
Samples: 196

Max RPKM: 7.9
Min RPKM: 1.3
Std RPKM: 1.3
Median RPKM: 3.9
GTEX-X5EB-0926-SM-46MVT 7.9
GTEX-Y114-1526-SM-4TT79 7.5
GTEX-WEY5-1426-SM-4LMJ3 7.4
GTEX-14C38-2626-SM-5RQI4 7.3
GTEX-YEC4-1926-SM-5IFHJ 7.3
GTEX-XXEK-1926-SM-4BRVD 7.1
GTEX-13CF3-1426-SM-5K7YY 6.9
GTEX-OXRL-1426-SM-3NM9E 6.9
Show all