CHGA

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:95.1 FPKM
GTEx:13.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA017369

 

Antibody CAB000023

 

Antibody CAB040544

 

Antibody CAB055506

 

Antibody CAB058688

 

Endothelial cells

Not detected   Not detected   Not detected   Not detected   Not detected  

Glandular cells

Medium   Medium   Medium   Medium   Medium  

Peripheral nerve/ganglion

Medium   Not detected   Not available   Not detected   Low  
         
         
         

COLON - HPA RNA-seq

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Average FPKM

95.1

overview Male, age 54
Sample 1
FPKM: 93.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 181.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 104.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 25.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 230.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 2.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 27.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

13.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 2.9
Samples: 149

Max RPKM: 35.6
Min RPKM: 0
Std RPKM: 3.6
Median RPKM: 2.1
GTEX-11EQ9-1526-SM-5PNY7 35.6
GTEX-XBED-1726-SM-47JYO 20.7
GTEX-Y5LM-1426-SM-5RQJL 16.3
GTEX-12696-1926-SM-5EGJT 10.8
GTEX-13OW6-2226-SM-5N9FL 8.4
GTEX-12ZZY-2726-SM-5EQ45 7.4
GTEX-YJ8A-1726-SM-5P9IQ 7.3
GTEX-12ZZW-2426-SM-5DUWE 7.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 24.8
Samples: 196

Max RPKM: 105.1
Min RPKM: 0
Std RPKM: 21.5
Median RPKM: 21.6
GTEX-QCQG-1626-SM-48U26 105.1
GTEX-147F3-1926-SM-5SIB9 103.4
GTEX-YF7O-1726-SM-5IFJ9 88.2
GTEX-WFG7-1526-SM-4LVMG 80.2
GTEX-U4B1-1126-SM-4DXV3 79.3
GTEX-WOFM-2026-SM-4OOSQ 71.2
GTEX-W5WG-2426-SM-4LMI6 69.6
GTEX-11DXX-1826-SM-5H126 69.4
Show all