CMA1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:9.1 FPKM
GTEx:1.6 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA052634

 

Antibody CAB000363

 

Endothelial cells

Not detected   Not detected  

Glandular cells

Not detected   Not detected  

Peripheral nerve/ganglion

Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

9.1

overview Male, age 54
Sample 1
FPKM: 0.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 1.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 1.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 3.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 42.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 5.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 8.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

1.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 1.2
Samples: 149

Max RPKM: 7.5
Min RPKM: 0
Std RPKM: 1.5
Median RPKM: 0.6
GTEX-147JS-2626-SM-5S2UX 7.5
GTEX-ZAB4-2426-SM-5HL8A 7.3
GTEX-Z93S-2626-SM-57WBX 7.1
GTEX-11P81-1426-SM-5P9JN 6.7
GTEX-XUZC-1526-SM-4BRV4 5.7
GTEX-11PRG-2026-SM-5GU5F 5.1
GTEX-1212Z-1826-SM-5FQSH 5.0
GTEX-13SLW-2826-SM-5Q5ES 4.8
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 1.9
Samples: 196

Max RPKM: 45.4
Min RPKM: 0
Std RPKM: 4
Median RPKM: 0.8
GTEX-11O72-2226-SM-5PNW2 45.4
GTEX-147JS-2526-SM-5S2Q8 19.6
GTEX-14BMV-2426-SM-5S2PP 19.5
GTEX-13FHP-2426-SM-5KLZ5 14.6
GTEX-U3ZH-1326-SM-4DXSF 9.9
GTEX-12KS4-2426-SM-5LU8P 7.9
GTEX-139TS-1926-SM-5IJFO 7.7
GTEX-12WSJ-1526-SM-5GCNI 7.2
Show all