AACS

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:10.4 FPKM
GTEx:1.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA058815

 

Endothelial cells

Low  

Glandular cells

High  

Peripheral nerve/ganglion

Medium  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

10.4

overview Male, age 54
Sample 1
FPKM: 16.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 10.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 14.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 8.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 7.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 6.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 9.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

1.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 1.1
Samples: 149

Max RPKM: 3.8
Min RPKM: 0.5
Std RPKM: 0.3
Median RPKM: 1.1
GTEX-11TT1-0926-SM-5GU5M 3.8
GTEX-V955-1726-SM-4JBHF 2.3
GTEX-XBED-1726-SM-47JYO 2.2
GTEX-117YX-0526-SM-5EGJH 2.0
GTEX-12WSL-1826-SM-5LZW9 1.9
GTEX-13PVQ-2726-SM-5L3H7 1.6
GTEX-YJ8A-1726-SM-5P9IQ 1.6
GTEX-11WQK-2526-SM-5CVL8 1.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 2.8
Samples: 196

Max RPKM: 16.6
Min RPKM: 0.6
Std RPKM: 1.7
Median RPKM: 2.6
GTEX-13W3W-2126-SM-5K7UX 16.6
GTEX-144GN-1126-SM-5LU33 7.3
GTEX-QDVN-1326-SM-48TZ3 7.0
GTEX-QCQG-1626-SM-48U26 6.6
GTEX-T5JW-1126-SM-4DM5V 6.3
GTEX-111CU-1426-SM-5GZYP 5.9
GTEX-131XG-1826-SM-5LZV4 5.9
GTEX-XUJ4-2026-SM-4BOOW 5.8
Show all