PSEN1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:37.7 FPKM
GTEx:7.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA030760

 

Antibody CAB006844

 

Endothelial cells

Medium   Not detected  

Glandular cells

High   Low  

Peripheral nerve/ganglion

Medium   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

37.7

overview Male, age 54
Sample 1
FPKM: 35.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 47.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 46.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 35.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 31.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 24.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 41.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

7.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 5.1
Samples: 149

Max RPKM: 7.8
Min RPKM: 3.1
Std RPKM: 0.7
Median RPKM: 5
GTEX-11WQK-2526-SM-5CVL8 7.8
GTEX-14E6C-2226-SM-5QGQG 7.7
GTEX-WFON-1326-SM-4LVMN 6.9
GTEX-148VJ-2426-SM-5NQ9Y 6.8
GTEX-Y5LM-1426-SM-5RQJL 6.7
GTEX-12696-1926-SM-5EGJT 6.5
GTEX-YJ8A-1726-SM-5P9IQ 6.5
GTEX-Y114-1626-SM-4TT7I 6.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 9.1
Samples: 196

Max RPKM: 18.1
Min RPKM: 3.3
Std RPKM: 3.1
Median RPKM: 9.3
GTEX-1122O-1526-SM-5N9CL 18.1
GTEX-14E6E-1526-SM-5RQIG 16.9
GTEX-111CU-1426-SM-5GZYP 16.6
GTEX-ZVT2-1926-SM-5GU5T 16.0
GTEX-Y5LM-1526-SM-4VDTA 15.9
GTEX-132AR-2726-SM-5PNVN 15.1
GTEX-ZV7C-1526-SM-5NQ72 15.0
GTEX-11P82-1026-SM-5BC5J 14.8
Show all