SP100

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:31.6 FPKM
GTEx:9.5 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA016707

 

Antibody HPA017384

 

Endothelial cells

Medium   Low  

Glandular cells

Medium   High  

Peripheral nerve/ganglion

Medium   Not detected  
   
   
   

COLON - HPA RNA-seq

? »

Average FPKM

31.6

overview Male, age 54
Sample 1
FPKM: 29.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 37.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 22.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 32.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 41.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 26.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 32.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

9.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 10.2
Samples: 149

Max RPKM: 17.2
Min RPKM: 5.6
Std RPKM: 2.1
Median RPKM: 10
GTEX-13X6I-2726-SM-5Q5ET 17.2
GTEX-145LS-2926-SM-5O99G 16.8
GTEX-ZAB4-2426-SM-5HL8A 16.8
GTEX-147GR-2826-SM-5RQK8 16.1
GTEX-13SLW-2826-SM-5Q5ES 16.0
GTEX-ZAJG-2626-SM-5S2NU 15.2
GTEX-WI4N-2226-SM-4OOS9 15.0
GTEX-12ZZY-2726-SM-5EQ45 14.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 8.7
Samples: 196

Max RPKM: 26.7
Min RPKM: 4.4
Std RPKM: 2.5
Median RPKM: 8.2
GTEX-14C38-2626-SM-5RQI4 26.7
GTEX-13O3O-2526-SM-5L3DR 18.6
GTEX-ZYVF-2826-SM-5GIDK 17.3
GTEX-11TTK-2426-SM-5PNYO 14.1
GTEX-13O3P-2326-SM-5KM55 14.0
GTEX-13FHP-2426-SM-5KLZ5 13.4
GTEX-11P81-1126-SM-5GU5G 13.0
GTEX-13OW6-2126-SM-5N9GL 12.8
Show all