CTSA

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:62.9 FPKM
GTEx:72.2 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Low
Keratinocytes:Low
Langerhans:Not detected
Melanocytes:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA031068

 

Antibody CAB024930

 

Fibroblasts

Not detected   Medium  

Keratinocytes

Low   Low  

Langerhans

Not detected   Not detected  

Melanocytes

Low   Medium  
   
   
   

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Medium
 
 
 
 

Antibody staining

Antibody HPA031068

 

Antibody CAB024930

 

Epidermal cells

Low   Medium  
      
      
      
   
   
   

SKIN - HPA RNA-seq

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Average FPKM

62.9

overview Female, age 34
Sample 1
FPKM: 74.4
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 57.4
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 57.0

SKIN - GTEx RNA-seq

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Average RPKM

72.2

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 66.6
Samples: 250

Max RPKM: 120
Min RPKM: 33.9
Std RPKM: 16
Median RPKM: 64.9
GTEX-WFG7-2026-SM-5SI7P 120.0
GTEX-ZTX8-1326-SM-4YCEL 115.4
GTEX-ZT9X-1526-SM-5DUXD 113.7
GTEX-13IVO-0726-SM-5LZYV 113.0
GTEX-WXYG-2026-SM-4E3IY 109.6
GTEX-139YR-1026-SM-5LZYN 107.0
GTEX-YECK-0326-SM-4W1YS 106.7
GTEX-11P7K-1126-SM-5HL4L 104.3
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 77.7
Samples: 357

Max RPKM: 149.7
Min RPKM: 42.1
Std RPKM: 16.3
Median RPKM: 76.2
GTEX-Y3IK-2426-SM-4WWDU 149.7
GTEX-WI4N-1026-SM-3LK7N 133.9
GTEX-13FTW-2626-SM-5K7WL 131.6
GTEX-X88G-0126-SM-47JZ3 123.5
GTEX-13FXS-0226-SM-5IJCK 122.0
GTEX-YB5E-2026-SM-5IFIS 121.9
GTEX-ZTX8-1426-SM-5DUVO 121.2
GTEX-ZGAY-0526-SM-4WWBB 120.7
Show all