CTSA

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:141.5 FPKM
GTEx:95.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA031068

 

Antibody CAB024930

 

Endothelial cells

Medium   Not detected  

Glandular cells

Medium   High  

Peripheral nerve/ganglion

Low   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

141.5

overview Male, age 54
Sample 1
FPKM: 105.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 152.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 132.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 208.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 154.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 95.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 141.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

95.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 48.6
Samples: 149

Max RPKM: 113.5
Min RPKM: 17.7
Std RPKM: 13.1
Median RPKM: 47.2
GTEX-132AR-2826-SM-5IJFV 113.5
GTEX-146FH-2426-SM-5Q5EW 84.1
GTEX-Y5LM-1426-SM-5RQJL 78.6
GTEX-13FH7-1626-SM-5J2O9 77.1
GTEX-WFG8-1726-SM-4LVM6 74.6
GTEX-111CU-1226-SM-5EGIN 71.6
GTEX-1339X-1726-SM-5P9J9 69.9
GTEX-XV7Q-2226-SM-4BRVY 69.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 143.2
Samples: 196

Max RPKM: 355.7
Min RPKM: 30.2
Std RPKM: 80
Median RPKM: 143.6
GTEX-UJHI-1126-SM-4IHLN 355.7
GTEX-Y5LM-1526-SM-4VDTA 346.8
GTEX-ZVT2-1926-SM-5GU5T 321.4
GTEX-ZV7C-1526-SM-5NQ72 316.3
GTEX-13FTW-1826-SM-5IJEN 313.0
GTEX-1122O-1526-SM-5N9CL 294.7
GTEX-11EM3-1526-SM-5A5KN 287.6
GTEX-14E6E-1526-SM-5RQIG 287.0
Show all