GRN

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:126.0 FPKM
GTEx:82.7 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA008763

 

Antibody HPA028747

 

Antibody CAB019394

 

Endothelial cells

Low   Medium   Not detected  

Glandular cells

Medium   High   Medium  

Peripheral nerve/ganglion

Not detected   Not available   Not available  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

126.0

overview Male, age 54
Sample 1
FPKM: 158.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 160.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 132.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 104.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 186.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 80.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 60.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

82.7

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 55.2
Samples: 149

Max RPKM: 117.1
Min RPKM: 29.2
Std RPKM: 14.1
Median RPKM: 53.5
GTEX-YEC3-2026-SM-4WWFL 117.1
GTEX-WFON-1326-SM-4LVMN 116.0
GTEX-ZQG8-2426-SM-57WEE 90.5
GTEX-WHPG-1626-SM-4M1ZL 85.7
GTEX-11P81-1426-SM-5P9JN 85.6
GTEX-Y114-1626-SM-4TT7I 83.4
GTEX-V955-1726-SM-4JBHF 78.3
GTEX-XV7Q-2226-SM-4BRVY 77.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 110.1
Samples: 196

Max RPKM: 218
Min RPKM: 35.9
Std RPKM: 42.2
Median RPKM: 112.3
GTEX-UJHI-1126-SM-4IHLN 218.0
GTEX-WFON-1426-SM-4LVMT 203.9
GTEX-U3ZN-2126-SM-4DXU1 203.5
GTEX-ZVT2-1926-SM-5GU5T 199.3
GTEX-WOFM-2026-SM-4OOSQ 198.7
GTEX-Q2AH-1226-SM-48TZL 195.6
GTEX-ZXES-1626-SM-5NQ7L 195.1
GTEX-1122O-1526-SM-5N9CL 187.8
Show all