ATP2C1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:27.7 FPKM
GTEx:9.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA035116

 

Antibody CAB010207

 

Endothelial cells

Medium   Medium  

Glandular cells

High   Medium  

Peripheral nerve/ganglion

Medium   Medium  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

27.7

overview Male, age 54
Sample 1
FPKM: 32.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 35.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 28.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 18.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 29.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 22.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 27.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

9.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 9.4
Samples: 149

Max RPKM: 24.3
Min RPKM: 5.2
Std RPKM: 2
Median RPKM: 9.2
GTEX-132AR-2826-SM-5IJFV 24.3
GTEX-ZAJG-2626-SM-5S2NU 19.3
GTEX-ZTTD-2626-SM-57WEX 13.1
GTEX-146FH-2426-SM-5Q5EW 12.5
GTEX-131XG-1526-SM-5GCNQ 12.3
GTEX-145LS-2926-SM-5O99G 12.3
GTEX-12WSG-2426-SM-5EQLZ 12.2
GTEX-WYVS-1126-SM-4SOJX 12.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 10.5
Samples: 196

Max RPKM: 18.7
Min RPKM: 6.2
Std RPKM: 1.8
Median RPKM: 10.3
GTEX-132AR-2726-SM-5PNVN 18.7
GTEX-R53T-1326-SM-48FCQ 16.5
GTEX-11TT1-1026-SM-5PNW7 15.8
GTEX-13OVJ-1726-SM-5IJDZ 15.7
GTEX-139YR-2126-SM-5KM11 15.1
GTEX-144GN-1126-SM-5LU33 14.8
GTEX-OXRK-1726-SM-3NB16 14.5
GTEX-O5YT-1426-SM-3MJHC 14.0
Show all