GPR56

GENERAL INFORMATION

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Gene name

GPR56

Gene description

G protein-coupled receptor 56

Protein class

Disease related genes
G-protein coupled receptors
Potential drug targets
Predicted intracellular proteins
Predicted membrane proteins
Predicted secreted proteins

Predicted localization

Intracellular,Membrane,Secreted

Number of transcripts

61
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HUMAN PROTEIN ATLAS INFORMATION

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RNA tissue category

HPA:Expressed in all
GTEx:Expressed in all

Protein evidence

Evidence at protein level

Protein localization

Most normal tissues showed weak to moderate cytoplasmic and nuclear staining with additional membranous positivity in several cases. Intestinal tract and bronchus exhibited strong immunoreactivity. Cells in CNS were mainly negative.

ANTIBODY RELIABILITY

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Data reliability
description

Pending RNA-based expert annotation.

Data reliability

Uncertain based on 1 antibody.
HPA046065
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RNA AND PROTEIN EXPRESSION SUMMARY

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RNA expression (FPKM) Protein expression (score)
Brain
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis



PROTEIN EXPRESSION OVERVIEW

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Organ

Expression



RNA EXPRESSION OVERVIEW

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HPA dataset
RNA tissue category:  Expressed in all

Organ

Expression

GTEx dataset
RNA tissue category:  Expressed in all

Organ

Expression



GENE INFORMATION

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Gene name

GPR56 (HGNC Symbol)

Synonyms

TM7LN4, TM7XN1

Description

G protein-coupled receptor 56 (HGNC Symbol)

Entrez gene summary

This gene encodes a member of the G protein-coupled receptor family and regulates brain cortical patterning. The encoded protein binds specifically to transglutaminase 2, a component of tissue and tumor stroma implicated as an inhibitor of tumor progression. Mutations in this gene are associated with a brain malformation known as bilateral frontoparietal polymicrogyria. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2014]

Chromosome

16

Cytoband

q21

Chromosome location (bp)

57610652 - 57665580

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000205336 (version 78.38)

Entrez gene

9289

UniProt

Q9Y653 (UniProt - Evidence at protein level)

neXtProt

NX_Q9Y653

Antibodypedia

GPR56 antibodies


PROTEIN BROWSER

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ENST00000388813
 
ENST00000456916
 
ENST00000540164
 
ENST00000561696
 
ENST00000561782
 
ENST00000561833
 
ENST00000561969
 
ENST00000561988
 
ENST00000562003
 
ENST00000562414
 
ENST00000562467
 
ENST00000562558
 
ENST00000562631
 
ENST00000562682
 
ENST00000563374
 
ENST00000563414
 
ENST00000563445
 
ENST00000563548
 
ENST00000563862
 
ENST00000564103
 
ENST00000564338
 
ENST00000564360
 
ENST00000564722
 
ENST00000564729
 
ENST00000564783
 
ENST00000565013
 
ENST00000565314
 
ENST00000565338
 
ENST00000565391
 
ENST00000565587
 
ENST00000565770
 
ENST00000565976
 
ENST00000566123
 
ENST00000566164
 
ENST00000566169
 
ENST00000566187
 
ENST00000566271
 
ENST00000566508
 
ENST00000566778
 
ENST00000567154
 
ENST00000567397
 
ENST00000567553
 
ENST00000567702
 
ENST00000567835
 
ENST00000567915
 
ENST00000568074
 
ENST00000568157
 
ENST00000568234
 
ENST00000568531
 
ENST00000568618
 
ENST00000568791
 
ENST00000568908
 
ENST00000568909
 
ENST00000568979
 
ENST00000569101
 
ENST00000569154
 
ENST00000569158
 
ENST00000569372
 
ENST00000569494
 
ENST00000569531
 
ENST00000570044
 
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PROTEIN INFORMATION

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Splice variant

Ensembl

UniProt

Protein class

Gene ontology

Length
(aa)

Molecular mass
(kDa)

Signal peptide
(predicted)

Transmembrane regions
(predicted)

GPR56-001 ENSP00000455215
ENST00000568909
Q9Y653
Show all »
Show » Show » 693 77.7 Yes 7
GPR56-002 ENSP00000456794
ENST00000567835
Q9Y653
Show all »
Show » Show » 693 77.7 Yes 7
GPR56-004 ENSP00000457456
ENST00000568908
Q9Y653
Show all »
Show » Show » 687 77.1 Yes 7
GPR56-005 ENSP00000455351
ENST00000562631
Q9Y653
Show all »
Show » Show » 687 77.1 Yes 7
GPR56-006 ENSP00000456620
ENST00000562558
Q9Y653
Show all »
Show » Show » 687 77.1 Yes 7
GPR56-007 ENSP00000373465
ENST00000388813
Q9Y653
Show all »
Show » Show » 687 77.1 Yes 7
GPR56-009 ENSP00000444911
ENST00000540164
Q9Y653
Show all »
Show » Show » 687 77.1 Yes 7
GPR56-010 ENSP00000456781
ENST00000565587
H3BSN3
Show all »
Show » 50 5.9 Yes 0
GPR56-011 ENSP00000456731
ENST00000565391
Show » 187 21 No 1
GPR56-014 ENSP00000454233
ENST00000568618
H3BNN3
Show all »
Show » 94 10.8 Yes 0
GPR56-015 ENSP00000456147
ENST00000563414
H3BRA1
Show all »
Show » 111 12.9 Yes 0
GPR56-016 ENSP00000457223
ENST00000564360
H3BTK9
Show all »
Show » 100 11.5 Yes 0
GPR56-017 ENSP00000458087
ENST00000568074
H3BVE9
Show all »
Show » 84 9.5 Yes 0
GPR56-018 ENSP00000456362
ENST00000569494
H3BQ46
Show all »
Show » 167 18.9 Yes 0
GPR56-019 ENSP00000456263
ENST00000566169
H3BRI7
Show all »
Show » 154 17.5 Yes 0
GPR56-020 ENSP00000456544
ENST00000569154
H3BS54
Show all »
Show » 118 12.1 Yes 0
GPR56-021 ENSP00000454289
ENST00000568157
H3BS94
Show all »
Show » 131 15.1 Yes 0
GPR56-022 ENSP00000457178
ENST00000566187
H3BTH7
Show all »
Show » 153 17.4 Yes 0
GPR56-023 ENSP00000457635
ENST00000569158
H3BUH2
Show all »
Show » 122 14.1 Yes 0
GPR56-024 ENSP00000456599
ENST00000564722
H3BS94
Show all »
Show » 131 15.1 Yes 0
GPR56-025 ENSP00000457953
ENST00000569101
H3BV52
Show all »
Show » 199 22.6 Yes 0
GPR56-026 ENSP00000457806
ENST00000563862
H3BUU6
Show all »
Show » 164 18.5 Yes 0
GPR56-027 ENSP00000456603
ENST00000565770
H3BS98
Show all »
Show » 90 9.3 Yes 0
GPR56-028 ENSP00000457994
ENST00000564103
H3BV84
Show all »
Show » 68 7.5 Yes 0
GPR56-029 ENSP00000456682
ENST00000568531
H3BSF7
Show all »
Show » 125 14 Yes 0
GPR56-030 ENSP00000455553
ENST00000568979
H3BQ11
Show all »
Show » 95 10.9 Yes 0
GPR56-031 ENSP00000457063
ENST00000567915
H3BRI2
Show all »
Show » 118 13.5 Yes 0
GPR56-032 ENSP00000456256
ENST00000562467
H3BRI2
Show all »
Show » 118 13.5 Yes 0
GPR56-033 ENSP00000455812
ENST00000567553
H3BQJ9
Show all »
Show » 91 10.1 Yes 0
GPR56-034 ENSP00000454607
ENST00000562003
H3BMY9
Show all »
Show » 146 16.5 Yes 0
GPR56-035 ENSP00000454263
ENST00000563548
H3BM73
Show all »
Show » 125 14.2 Yes 0
GPR56-036 ENSP00000458014
ENST00000568234
H3BVA0
Show all »
Show » 145 16.4 Yes 0
GPR56-037 ENSP00000454855
ENST00000566271
H3BNH4
Show all »
Show » 198 22.3 Yes 0
GPR56-047 ENSP00000458063
ENST00000561833
H3BVD3
Show all »
Show » 162 18.4 Yes 0
GPR56-048 ENSP00000457979
ENST00000569372
H3BV72
Show all »
Show » 110 12.8 Yes 0
GPR56-049 ENSP00000454364
ENST00000565013
H3BMF8
Show all »
Show » 119 13.7 Yes 0
GPR56-050 ENSP00000455600
ENST00000561696
H3BQ46
Show all »
Show » 167 18.9 Yes 0
GPR56-051 ENSP00000456632
ENST00000567154
H3BSB8
Show all »
Show » 116 13.4 Yes 0
GPR56-052 ENSP00000455074
ENST00000566164
H3BSB8
Show all »
Show » 116 13.4 Yes 0
GPR56-053 ENSP00000456494
ENST00000562414
H3BS14
Show all »
Show » 42 4.9 Yes 0
GPR56-054 ENSP00000456787
ENST00000567702
H3BSN7
Show all »
Show » 107 12.4 Yes 0
GPR56-055 ENSP00000457122
ENST00000565338
H3BTD2
Show all »
Show » 56 6.6 Yes 0
GPR56-056 ENSP00000456002
ENST00000561969
H3BQZ1
Show all »
Show » 160 18.1 Yes 0
GPR56-057 ENSP00000457073
ENST00000563445
H3BT88
Show all »
Show » 113 13.1 Yes 0
GPR56-058 ENSP00000457143
ENST00000566123
H3BVE9
Show all »
Show » 84 9.5 Yes 0
GPR56-059 ENSP00000455176
ENST00000561782
H3BP67
Show all »
Show » 168 18.9 Yes 0
GPR56-060 ENSP00000456819
ENST00000562682
H3BSR1
Show all »
Show » 77 8.7 Yes 0
GPR56-061 ENSP00000457307
ENST00000569531
H3BMF8
Show all »
Show » 119 13.7 Yes 0
GPR56-063 ENSP00000456469
ENST00000565314
H3BRZ4
Show all »
Show » 141 16 Yes 0
GPR56-064 ENSP00000454321
ENST00000568791
H3BMC2
Show all »
Show » 81 9.1 Yes 0
GPR56-065 ENSP00000456238
ENST00000561988
H3BRH0
Show all »
Show » 256 29 Yes 0
GPR56-066 ENSP00000454490
ENST00000564783
Show » 6 0.7 No 0
GPR56-067 ENSP00000454933
ENST00000565976
H3BNN3
Show all »
Show » 94 10.8 Yes 0
GPR56-068 ENSP00000455965
ENST00000564729
H3BQW4
Show all »
Show » 55 6.4 Yes 0
GPR56-069 ENSP00000454779
ENST00000566508
H3BPC0
Show all »
Show » 97 10.1 Yes 0
GPR56-070 ENSP00000455209
ENST00000563374
H3BP94
Show all »
Show » 78 8.8 Yes 0
GPR56-071 ENSP00000456166
ENST00000570044
H3BRB4
Show all »
Show » 70 8 Yes 0
GPR56-072 ENSP00000456796
ENST00000566778
H3BSP5
Show all »
Show » 103 11.7 Yes 0
GPR56-074 ENSP00000457657
ENST00000564338
H3BUI6
Show all »
Show » 114 13 Yes 0
GPR56-075 ENSP00000455226
ENST00000567397
H3BPA6
Show all »
Show » 98 11.1 Yes 0
GPR56-201 ENSP00000398034
ENST00000456916
Q9Y653
Show all »
Show » Show » 692 77.5 Yes 7