AGAP6

GENERAL INFORMATION

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Gene name

AGAP6

Gene description

ArfGAP with GTPase domain, ankyrin repeat and PH domain 6

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

4
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HUMAN PROTEIN ATLAS INFORMATION

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RNA tissue category

HPA:Expressed in all
GTEx:Expressed in all

Protein evidence

Evidence at transcript level

Protein localization

RNA-based expert annotation could not be performed.

ANTIBODY RELIABILITY

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Data reliability
description

Pending external verification. Caution, targets protein from more than one gene. Presumed off target binding observed and disregarded.

Data reliability

Uncertain based on 1 antibody.
HPA042490
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RNA AND PROTEIN EXPRESSION SUMMARY

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RNA expression (FPKM) Protein expression (score)
Brain
N/A
Endocrine tissues
N/A
Bone marrow & immune system
N/A
Muscle tissues
N/A
Lung
N/A
Nasopharynx
N/A
N/A
Bronchus
N/A
N/A
Lung
N/A
Liver & gallbladder
N/A
Liver
N/A
Pancreas
N/A
Pancreas
N/A
Gastrointestinal tract
N/A
Kidney & urinary bladder
N/A
Male tissues
N/A
Testis
N/A
Epididymis
N/A
N/A
Prostate
N/A
Seminal vesicle
N/A
N/A
Female tissues
N/A
Breast
N/A
N/A
Vagina
N/A
N/A
Cervix, uterine
N/A
N/A
Ovary
N/A
Placenta
N/A
Adipose & soft tissue
N/A
Skin
N/A
Skin
N/A
Cerebral cortex

Lymph node

Liver

Stomach

Colon

Kidney

Testis



PROTEIN EXPRESSION OVERVIEW

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RNA-based expert annotation could not be performed, due to inconclusive results. View immunohistochemistry primary data.


RNA EXPRESSION OVERVIEW

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HPA dataset
RNA tissue category:  Expressed in all

Organ

Expression

GTEx dataset
RNA tissue category:  Expressed in all

Organ

Expression



GENE INFORMATION

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Gene name

AGAP6 (HGNC Symbol)

Synonyms

bA324H6.1, CTGLF3

Description

ArfGAP with GTPase domain, ankyrin repeat and PH domain 6 (HGNC Symbol)

Entrez gene summary

Chromosome

10

Cytoband

q11.23

Chromosome location (bp)

49982190 - 50010499

Protein evidence

Evidence at transcript level (all genes)

Ensembl

ENSG00000204149 (version 78.38)

Entrez gene

414189

UniProt

Q5VW22 (UniProt - Evidence at transcript level)

neXtProt

NX_Q5VW22

Antibodypedia

AGAP6 antibodies


PROTEIN BROWSER

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ENST00000374056
 
ENST00000412531
 
ENST00000618025
 
ENST00000622418
 
 
 
 


PROTEIN INFORMATION

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Splice variant

Ensembl

UniProt

Protein class

Gene ontology

Length
(aa)

Molecular mass
(kDa)

Signal peptide
(predicted)

Transmembrane regions
(predicted)

AGAP6-001 ENSP00000400972
ENST00000412531
Q5VW22
Show all »
Show » Show » 686 75.7 No 0
AGAP6-002 ENSP00000483426
ENST00000618025
Show » Show » 555 61.3 No 0
AGAP6-201 ENSP00000363168
ENST00000374056
Q5VW22
Show all »
Show » Show » 663 73.1 No 0
AGAP6-202 ENSP00000485012
ENST00000622418
Show » Show » 658 72.7 No 0