SEMA4D

GENERAL INFORMATION

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Gene name

SEMA4D

Gene description

Sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D

Protein class

CD markers
Plasma proteins
Predicted intracellular proteins
Predicted membrane proteins
Predicted secreted proteins

Predicted localization

Intracellular,Membrane,Secreted

Number of transcripts

13
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HUMAN PROTEIN ATLAS INFORMATION

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RNA tissue category

HPA:Expressed in all
GTEx:Expressed in all

Protein evidence

Evidence at protein level

Protein localization

General cytoplasmic expression.

ANTIBODY RELIABILITY

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Data reliability
description

Pending RNA-based expert annotation.

Data reliability

Uncertain based on 2 antibodies.
HPA015662 , HPA023277
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RNA AND PROTEIN EXPRESSION SUMMARY

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RNA expression (FPKM) Protein expression (score)
Brain
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis



PROTEIN EXPRESSION OVERVIEW

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Organ

Expression



RNA EXPRESSION OVERVIEW

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HPA dataset
RNA tissue category:  Expressed in all

Organ

Expression

GTEx dataset
RNA tissue category:  Expressed in all

Organ

Expression



GENE INFORMATION

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Gene name

SEMA4D (HGNC Symbol)

Synonyms

C9orf164, CD100, coll-4, FLJ39737, SEMAJ

Description

Sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D (HGNC Symbol)

Entrez gene summary

Chromosome

9

Cytoband

q22.2

Chromosome location (bp)

89360787 - 89498130

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000187764 (version 78.38)

Entrez gene

10507

UniProt

Q92854 (UniProt - Evidence at protein level)

neXtProt

NX_Q92854

Antibodypedia

SEMA4D antibodies


PROTEIN BROWSER

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ENST00000339861
 
ENST00000356444
 
ENST00000418828
 
ENST00000420101
 
ENST00000420670
 
ENST00000420681
 
ENST00000420987
 
ENST00000422704
 
ENST00000433650
 
ENST00000438547
 
ENST00000450295
 
ENST00000455551
 
ENST00000540475
 
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PROTEIN INFORMATION

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Splice variant

Ensembl

UniProt

Protein class

Gene ontology

Length
(aa)

Molecular mass
(kDa)

Signal peptide
(predicted)

Transmembrane regions
(predicted)

SEMA4D-001 ENSP00000411981
ENST00000455551
Q92854
Show all »
Show » Show » 738 82.2 Yes 0
SEMA4D-004 ENSP00000405102
ENST00000438547
Q92854
Show all »
Show » Show » 862 96.1 Yes 1
SEMA4D-005 ENSP00000388768
ENST00000422704
Q92854
Show all »
Show » Show » 862 96.1 Yes 1
SEMA4D-006 ENSP00000344923
ENST00000339861
Q92854
Show all »
Show » Show » 738 82.2 Yes 0
SEMA4D-008 ENSP00000399948
ENST00000420101
Q92854
Show all »
Show » Show » 123 14.2 No 0
SEMA4D-013 ENSP00000390754
ENST00000420681
C9JFP1
Show all »
Show » Show » 146 16.6 Yes 0
SEMA4D-014 ENSP00000416747
ENST00000418828
C9JD54
Show all »
Show » 59 6.8 Yes 0
SEMA4D-015 ENSP00000405652
ENST00000420670
Show » 1 0.1 No 0
SEMA4D-016 ENSP00000413352
ENST00000433650
C9JYS7
Show all »
Show » Show » 76 8.6 Yes 0
SEMA4D-018 ENSP00000416523
ENST00000450295
Q92854
Show all »
Show » Show » 862 96.1 Yes 1
SEMA4D-020 ENSP00000438389
ENST00000540475
F5H044
Show all »
Show » Show » 66 7.6 Yes 0
SEMA4D-201 ENSP00000348822
ENST00000356444
Q92854
Show all »
Show » Show » 862 96.1 Yes 1
SEMA4D-202 ENSP00000391733
ENST00000420987
Q92854
Show all »
Show » Show » 738 82.2 Yes 0