BCAM

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:12.5 FPKM
GTEx:19.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Not available
 

Antibody staining

Antibody HPA005654

 

Endothelial cells

Medium  

Glandular cells

Medium  

Peripheral nerve/ganglion

Not available  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

12.5

overview Male, age 54
Sample 1
FPKM: 7.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 12.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 5.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 31.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 18.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 8.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 3.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

19.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 19.9
Samples: 149

Max RPKM: 61.3
Min RPKM: 6.1
Std RPKM: 10
Median RPKM: 17.1
GTEX-WFON-1326-SM-4LVMN 61.3
GTEX-13OW6-2226-SM-5N9FL 56.6
GTEX-13X6K-2726-SM-5O9DG 54.3
GTEX-145LS-2926-SM-5O99G 45.9
GTEX-12ZZY-2726-SM-5EQ45 40.1
GTEX-147GR-2826-SM-5RQK8 39.9
GTEX-11DXX-1926-SM-5EGJK 38.6
GTEX-13OVJ-1826-SM-5KM2D 37.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 19.8
Samples: 196

Max RPKM: 141.4
Min RPKM: 5.9
Std RPKM: 16
Median RPKM: 14.9
GTEX-13OVG-1426-SM-5K7VP 141.4
GTEX-13OVI-2026-SM-5J1MU 102.2
GTEX-13W3W-2126-SM-5K7UX 89.5
GTEX-111VG-2226-SM-5N9DU 69.3
GTEX-14BMV-2426-SM-5S2PP 63.8
GTEX-13O3O-2526-SM-5L3DR 60.3
GTEX-13FHP-2426-SM-5KLZ5 59.0
GTEX-ZXES-1626-SM-5NQ7L 58.1
Show all