CALR

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:307.4 FPKM
GTEx:157.5 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA002242

 

Antibody CAB001513

 

Endothelial cells

Not detected   Medium  

Glandular cells

Not detected   Medium  

Peripheral nerve/ganglion

Not detected   Not available  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

307.4

overview Male, age 54
Sample 1
FPKM: 281.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 247.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 280.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 244.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 390.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 336.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 370.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

157.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 120.9
Samples: 149

Max RPKM: 585.1
Min RPKM: 59.6
Std RPKM: 54
Median RPKM: 112.1
GTEX-132AR-2826-SM-5IJFV 585.1
GTEX-11TT1-0926-SM-5GU5M 282.6
GTEX-13X6I-2726-SM-5Q5ET 277.9
GTEX-12ZZW-2426-SM-5DUWE 240.1
GTEX-14C39-1626-SM-5S2P4 235.7
GTEX-ZAJG-2626-SM-5S2NU 223.1
GTEX-146FH-2426-SM-5Q5EW 208.7
GTEX-139D8-2926-SM-5IJBM 200.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 194.1
Samples: 196

Max RPKM: 721.8
Min RPKM: 49.4
Std RPKM: 102.3
Median RPKM: 169.6
GTEX-132AR-2726-SM-5PNVN 721.8
GTEX-PWOO-1326-SM-48TCJ 538.5
GTEX-QDVN-1326-SM-48TZ3 522.3
GTEX-XV7Q-2126-SM-4BRVX 499.5
GTEX-11TT1-1026-SM-5PNW7 499.0
GTEX-131XE-0826-SM-5HL9W 476.8
GTEX-U4B1-1126-SM-4DXV3 469.9
GTEX-13S86-1626-SM-5Q5C5 447.0
Show all