BSG

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:372.0 FPKM
GTEx:262.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA036048

 

Antibody CAB002427

 

Endothelial cells

Not detected   Not detected  

Glandular cells

Medium   High  

Peripheral nerve/ganglion

Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

372.0

overview Male, age 54
Sample 1
FPKM: 267.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 326.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 493.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 856.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 282.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 226.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 151.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

262.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 223.5
Samples: 149

Max RPKM: 547.2
Min RPKM: 85.6
Std RPKM: 62.5
Median RPKM: 211.9
GTEX-13O1R-2426-SM-5KLZZ 547.2
GTEX-14BMU-1326-SM-5RQIH 366.5
GTEX-14A5H-1626-SM-5SIAN 364.6
GTEX-11I78-1326-SM-5PNY9 352.9
GTEX-XV7Q-2226-SM-4BRVY 340.8
GTEX-ZVT2-1726-SM-51MRO 340.7
GTEX-12BJ1-2026-SM-5FQUH 336.7
GTEX-13PL7-2426-SM-5J2N3 335.8
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 302.3
Samples: 196

Max RPKM: 846.9
Min RPKM: 106.6
Std RPKM: 116.9
Median RPKM: 296
GTEX-1399R-2226-SM-5P9JB 846.9
GTEX-W5WG-2426-SM-4LMI6 545.1
GTEX-131XG-1826-SM-5LZV4 520.0
GTEX-P4QT-1426-SM-3NMCX 514.2
GTEX-14E6E-1526-SM-5RQIG 514.1
GTEX-Q2AI-0926-SM-48U1F 511.8
GTEX-TML8-1326-SM-4DXTO 508.6
GTEX-Y3IK-1826-SM-4WWDS 497.9
Show all