ALDH1A1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:71.4 FPKM
GTEx:94.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA002123

 

Antibody CAB020690

 

Endothelial cells

Not detected   Low  

Glandular cells

Not detected   Not detected  

Peripheral nerve/ganglion

Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

71.4

overview Male, age 54
Sample 1
FPKM: 47.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 60.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 69.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 85.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 60.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 97.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 79.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

94.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 115.1
Samples: 149

Max RPKM: 233.7
Min RPKM: 50
Std RPKM: 33.1
Median RPKM: 115.2
GTEX-145LS-2926-SM-5O99G 233.7
GTEX-ZE7O-2626-SM-51MSS 204.1
GTEX-13FTW-2126-SM-5K7YG 202.1
GTEX-ZYT6-2826-SM-5GICX 183.2
GTEX-ZQG8-2426-SM-57WEE 183.1
GTEX-145MO-2626-SM-5QGPD 177.3
GTEX-147GR-2826-SM-5RQK8 174.0
GTEX-12WSD-2626-SM-5EGJE 166.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 74.6
Samples: 196

Max RPKM: 238.4
Min RPKM: 14.3
Std RPKM: 36.2
Median RPKM: 68.2
GTEX-14BMV-2426-SM-5S2PP 238.4
GTEX-145LS-2726-SM-5Q5D8 218.6
GTEX-111VG-2226-SM-5N9DU 194.5
GTEX-12ZZZ-2426-SM-5GCNN 175.1
GTEX-11TTK-2426-SM-5PNYO 162.1
GTEX-145MO-2426-SM-5NQ9W 152.2
GTEX-ZYFC-2626-SM-5NQ6S 145.4
GTEX-13VXT-2426-SM-5LU46 142.1
Show all