GART

COLON - Expression summary

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RNA expression

HPA:20.2 FPKM
GTEx:8.5 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA002119

 

Antibody HPA005779

 

Endothelial cells

Not detected   Low  

Glandular cells

High   Medium  

Peripheral nerve/ganglion

Not detected   Not available  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

20.2

overview Male, age 54
Sample 1
FPKM: 14.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 18.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 22.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 12.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 20.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 24.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 29.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

8.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 7.9
Samples: 149

Max RPKM: 17.9
Min RPKM: 4.6
Std RPKM: 1.9
Median RPKM: 7.6
GTEX-11WQK-2526-SM-5CVL8 17.9
GTEX-11TT1-0926-SM-5GU5M 17.1
GTEX-13O1R-2426-SM-5KLZZ 16.2
GTEX-12WSL-1826-SM-5LZW9 11.9
GTEX-XXEK-1826-SM-4BRVC 11.8
GTEX-11I78-1326-SM-5PNY9 11.4
GTEX-1339X-1726-SM-5P9J9 11.4
GTEX-14E6C-2226-SM-5QGQG 11.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 9.1
Samples: 196

Max RPKM: 19.4
Min RPKM: 4.6
Std RPKM: 2.2
Median RPKM: 8.7
GTEX-11TT1-1026-SM-5PNW7 19.4
GTEX-PWOO-1326-SM-48TCJ 16.5
GTEX-O5YT-1426-SM-3MJHC 16.0
GTEX-13OVJ-1726-SM-5IJDZ 15.6
GTEX-144GM-1226-SM-5LU52 15.6
GTEX-11WQK-2126-SM-5EQME 15.5
GTEX-ZYVF-2826-SM-5GIDK 14.9
GTEX-1339X-1626-SM-5IJDN 14.3
Show all