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COLON - Expression summary

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RNA expression

HPA:7.6 FPKM
GTEx:8.3 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA030342

 

Endothelial cells

Medium  

Glandular cells

Medium  

Peripheral nerve/ganglion

Not available  
 
 

COLON - HPA RNA-seq

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Average FPKM

7.6

overview Male, age 54
Sample 1
FPKM: 9.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 8.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 8.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 6.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 6.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 5.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 6.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

8.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 7.1
Samples: 149

Max RPKM: 12.5
Min RPKM: 2.2
Std RPKM: 1.8
Median RPKM: 7.1
GTEX-139D8-2926-SM-5IJBM 12.5
GTEX-V955-1726-SM-4JBHF 11.8
GTEX-132AR-2826-SM-5IJFV 11.5
GTEX-14A5I-2426-SM-5Q5CP 11.1
GTEX-ZAJG-2626-SM-5S2NU 11.0
GTEX-ZVT4-2626-SM-5N9GJ 11.0
GTEX-139TS-2226-SM-5J2N1 10.4
GTEX-12WSL-1826-SM-5LZW9 10.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 9.6
Samples: 196

Max RPKM: 16.7
Min RPKM: 3
Std RPKM: 2.6
Median RPKM: 9.6
GTEX-XV7Q-2126-SM-4BRVX 16.7
GTEX-Q734-1126-SM-48TZY 16.3
GTEX-R53T-1326-SM-48FCQ 16.2
GTEX-139TS-1926-SM-5IJFO 15.3
GTEX-WHWD-1226-SM-4OOS1 14.9
GTEX-139YR-2126-SM-5KM11 14.5
GTEX-1399R-2226-SM-5P9JB 14.3
GTEX-145LT-0926-SM-5LU9C 14.1
Show all