THRA

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:20.0 FPKM
GTEx:19.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:Not available
 

Antibody staining

Antibody HPA009654

 

Antibody CAB023349

 

Endothelial cells

Low   High  

Glandular cells

Medium   High  

Peripheral nerve/ganglion

Medium   Not available  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

20.0

overview Male, age 54
Sample 1
FPKM: 17.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 19.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 15.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 20.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 15.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 31.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 20.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

19.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 22.7
Samples: 149

Max RPKM: 41.1
Min RPKM: 6.7
Std RPKM: 6.6
Median RPKM: 22.3
GTEX-ZAB5-1426-SM-5HL9D 41.1
GTEX-XUZC-1526-SM-4BRV4 39.3
GTEX-131XG-1526-SM-5GCNQ 36.6
GTEX-XUW1-1826-SM-4BOQD 34.6
GTEX-ZPU1-1726-SM-4WWFV 34.5
GTEX-13OVI-2126-SM-5KM3U 34.3
GTEX-ZLV1-1326-SM-4WWER 34.2
GTEX-WFG8-1726-SM-4LVM6 33.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 16.9
Samples: 196

Max RPKM: 32.9
Min RPKM: 4.6
Std RPKM: 5.8
Median RPKM: 15.7
GTEX-ZV6S-1226-SM-59HLH 32.9
GTEX-ZYFG-1926-SM-5GID5 32.4
GTEX-U3ZH-1326-SM-4DXSF 31.9
GTEX-V955-1626-SM-4JBHJ 31.4
GTEX-11GSP-1626-SM-5986N 31.1
GTEX-14AS3-1126-SM-5Q5CR 30.5
GTEX-RU1J-1326-SM-46MUL 30.2
GTEX-T6MO-0826-SM-4DM51 29.9
Show all