FANCE

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:2.4 FPKM
GTEx:2.4 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody CAB014893

 

Endothelial cells

High  

Glandular cells

High  

Peripheral nerve/ganglion

High  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

2.4

overview Male, age 54
Sample 1
FPKM: 1.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 2.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 2.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 1.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 1.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 3.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 3.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

2.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 2.4
Samples: 149

Max RPKM: 4.9
Min RPKM: 0.7
Std RPKM: 0.8
Median RPKM: 2.3
GTEX-ZAJG-2626-SM-5S2NU 4.9
GTEX-1399R-2126-SM-5K7WZ 4.6
GTEX-146FH-2426-SM-5Q5EW 4.6
GTEX-11P81-1426-SM-5P9JN 4.4
GTEX-11WQK-2526-SM-5CVL8 4.3
GTEX-13OW8-2726-SM-5L3FZ 4.2
GTEX-WI4N-2226-SM-4OOS9 4.1
GTEX-ZAB5-1426-SM-5HL9D 4.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 2.4
Samples: 196

Max RPKM: 5.9
Min RPKM: 0.8
Std RPKM: 0.6
Median RPKM: 2.3
GTEX-R53T-1326-SM-48FCQ 5.9
GTEX-11WQK-2126-SM-5EQME 4.6
GTEX-PWOO-1326-SM-48TCJ 4.2
GTEX-146FQ-1926-SM-5NQBY 3.9
GTEX-14AS3-1126-SM-5Q5CR 3.8
GTEX-1399R-2226-SM-5P9JB 3.7
GTEX-144GN-1126-SM-5LU33 3.7
GTEX-XUJ4-2026-SM-4BOOW 3.7
Show all