CARS

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:13.7 FPKM
GTEx:9.5 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA002383

 

Antibody HPA002384

 

Antibody CAB075734

 

Antibody CAB075735

 

Antibody CAB075736

 

Antibody CAB075737

 

Endothelial cells

Not detected   Not detected   Not detected   High   Medium   Medium  

Glandular cells

Low   Low   Low   High   Medium   Medium  

Peripheral nerve/ganglion

Not available   Medium   Medium   High   High   High  
           
           
           

COLON - HPA RNA-seq

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Average FPKM

13.7

overview Male, age 54
Sample 1
FPKM: 12.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 13.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 15.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 10.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 13.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 15.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 13.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

9.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 10.0
Samples: 149

Max RPKM: 29.3
Min RPKM: 5.6
Std RPKM: 3.6
Median RPKM: 8.9
GTEX-11WQK-2526-SM-5CVL8 29.3
GTEX-13O1R-2426-SM-5KLZZ 28.8
GTEX-14A5H-1626-SM-5SIAN 21.6
GTEX-131XG-1526-SM-5GCNQ 20.4
GTEX-11TUW-2326-SM-5EQMO 19.6
GTEX-ZTTD-2626-SM-57WEX 19.2
GTEX-XAJ8-0726-SM-47JY5 19.0
GTEX-11TT1-0926-SM-5GU5M 18.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 8.9
Samples: 196

Max RPKM: 23.4
Min RPKM: 5.8
Std RPKM: 2.9
Median RPKM: 8
GTEX-11WQK-2126-SM-5EQME 23.4
GTEX-XYKS-2226-SM-4E3IU 22.0
GTEX-11TUW-2026-SM-5EQL8 20.6
GTEX-13W3W-2126-SM-5K7UX 19.7
GTEX-PWOO-1326-SM-48TCJ 18.9
GTEX-11TT1-1026-SM-5PNW7 18.5
GTEX-XAJ8-0426-SM-47JYJ 17.0
GTEX-131XG-1826-SM-5LZV4 16.5
Show all