GSS

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:34.0 FPKM
GTEx:21.0 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA054508

 

Endothelial cells

Low  

Glandular cells

Medium  

Peripheral nerve/ganglion

Not detected  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

34.0

overview Male, age 54
Sample 1
FPKM: 32.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 31.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 37.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 25.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 27.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 38.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 46.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

21.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 11.5
Samples: 149

Max RPKM: 21.1
Min RPKM: 5.7
Std RPKM: 2.7
Median RPKM: 11.2
GTEX-V955-1726-SM-4JBHF 21.1
GTEX-11ONC-1926-SM-5GU75 21.0
GTEX-13OW6-2226-SM-5N9FL 18.2
GTEX-XBED-1726-SM-47JYO 17.8
GTEX-Y5LM-1426-SM-5RQJL 17.5
GTEX-11TT1-0926-SM-5GU5M 17.3
GTEX-13O1R-2426-SM-5KLZZ 17.1
GTEX-ZTTD-2626-SM-57WEX 17.1
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 30.5
Samples: 196

Max RPKM: 61.3
Min RPKM: 5.1
Std RPKM: 14.5
Median RPKM: 34.5
GTEX-XPVG-1826-SM-4B64X 61.3
GTEX-145LT-0926-SM-5LU9C 58.8
GTEX-1399R-2226-SM-5P9JB 58.1
GTEX-13O21-2426-SM-5MR4A 54.5
GTEX-YF7O-1726-SM-5IFJ9 54.1
GTEX-Y3IK-1826-SM-4WWDS 53.5
GTEX-XUJ4-2026-SM-4BOOW 52.5
GTEX-146FQ-1926-SM-5NQBY 51.2
Show all