EZR

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:110.8 FPKM
GTEx:52.6 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA021616

 

Antibody CAB004035

 

Antibody CAB047324

 

Endothelial cells

Not detected   Not detected   Not detected  

Glandular cells

High   Medium   High  

Peripheral nerve/ganglion

Not detected   Medium   Not detected  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

110.8

overview Male, age 54
Sample 1
FPKM: 67.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 120.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 179.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 150.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 86.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 82.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 88.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

52.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 23.6
Samples: 149

Max RPKM: 59.7
Min RPKM: 8.6
Std RPKM: 8.2
Median RPKM: 22.1
GTEX-14C5O-2626-SM-5RQI5 59.7
GTEX-YEC3-2026-SM-4WWFL 52.1
GTEX-11WQK-2526-SM-5CVL8 52.0
GTEX-XBED-1726-SM-47JYO 48.1
GTEX-XAJ8-0726-SM-47JY5 43.9
GTEX-ZZ64-0826-SM-5E449 41.8
GTEX-WFG7-1626-SM-4LVMF 40.7
GTEX-13OW6-2226-SM-5N9FL 40.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 81.7
Samples: 196

Max RPKM: 516.4
Min RPKM: 11.3
Std RPKM: 58.1
Median RPKM: 76.1
GTEX-117YW-1826-SM-5PNY5 516.4
GTEX-111CU-1426-SM-5GZYP 297.5
GTEX-S4Q7-0826-SM-4AD5E 274.0
GTEX-1122O-1526-SM-5N9CL 200.8
GTEX-ZVT2-1926-SM-5GU5T 199.2
GTEX-144GM-1226-SM-5LU52 195.6
GTEX-14E6E-1526-SM-5RQIG 187.8
GTEX-131XG-1826-SM-5LZV4 163.7
Show all