FH

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:49.9 FPKM
GTEx:35.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA025770

 

Antibody HPA025948

 

Antibody HPA027341

 

Antibody CAB017785

 

Endothelial cells

Not detected   Not detected   High   Low  

Glandular cells

High   Medium   High   Medium  

Peripheral nerve/ganglion

Not detected   Not detected   Medium   Medium  
       
       
       

COLON - HPA RNA-seq

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Average FPKM

49.9

overview Male, age 54
Sample 1
FPKM: 34.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 45.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 65.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 45.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 34.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 58.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 65.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

35.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 30.1
Samples: 149

Max RPKM: 46.2
Min RPKM: 10.6
Std RPKM: 6.9
Median RPKM: 31
GTEX-ZP4G-1526-SM-57WE5 46.2
GTEX-1399U-2226-SM-5KLZI 45.8
GTEX-13FTW-2126-SM-5K7YG 44.2
GTEX-131XG-1526-SM-5GCNQ 43.4
GTEX-ZTSS-1226-SM-51MSZ 42.0
GTEX-ZPIC-2626-SM-57WE2 41.7
GTEX-11ZTT-1626-SM-5EQKR 41.5
GTEX-14E6E-1726-SM-5S2R6 41.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 41.4
Samples: 196

Max RPKM: 78.6
Min RPKM: 8.5
Std RPKM: 12.8
Median RPKM: 41.5
GTEX-T5JW-1126-SM-4DM5V 78.6
GTEX-U4B1-1126-SM-4DXV3 74.6
GTEX-146FQ-1926-SM-5NQBY 72.6
GTEX-1399R-2226-SM-5P9JB 68.5
GTEX-XV7Q-2126-SM-4BRVX 66.9
GTEX-Y3IK-1826-SM-4WWDS 66.6
GTEX-YF7O-1726-SM-5IFJ9 64.8
GTEX-145MN-1726-SM-5SIA6 63.4
Show all