ATRX

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:10.4 FPKM
GTEx:5.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA001906

 

Antibody CAB009372

 

Antibody CAB068176

 

Endothelial cells

High   High   High  

Glandular cells

High   High   Medium  

Peripheral nerve/ganglion

Not available   High   High  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

10.4

overview Male, age 54
Sample 1
FPKM: 11.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 12.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 10.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 8.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 15.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 6.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 7.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

5.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 6.7
Samples: 149

Max RPKM: 12.6
Min RPKM: 3.6
Std RPKM: 1.3
Median RPKM: 6.7
GTEX-14E6C-2226-SM-5QGQG 12.6
GTEX-11WQK-2526-SM-5CVL8 10.6
GTEX-145ME-1126-SM-5SIAT 10.2
GTEX-131XG-1526-SM-5GCNQ 10.0
GTEX-13VXT-2026-SM-5L3EW 9.9
GTEX-111YS-1826-SM-5GIEP 9.6
GTEX-14E6E-1726-SM-5S2R6 9.4
GTEX-ZAB5-1426-SM-5HL9D 9.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 5.0
Samples: 196

Max RPKM: 10.8
Min RPKM: 1.7
Std RPKM: 1.8
Median RPKM: 4.7
GTEX-XXEK-1926-SM-4BRVD 10.8
GTEX-ZV6S-1226-SM-59HLH 9.9
GTEX-11WQK-2126-SM-5EQME 9.8
GTEX-12WSL-1626-SM-5GCMU 9.8
GTEX-111YS-1626-SM-5GZZ9 9.7
GTEX-U3ZH-1326-SM-4DXSF 9.1
GTEX-11TUW-2026-SM-5EQL8 9.0
GTEX-13O3O-2526-SM-5L3DR 8.8
Show all