PRDM1

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:10.3 FPKM
GTEx:2.3 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA030033

 

Endothelial cells

Not detected  

Glandular cells

Low  

Peripheral nerve/ganglion

Not detected  
 

COLON - HPA RNA-seq

? »

Average FPKM

10.3

overview Male, age 54
Sample 1
FPKM: 5.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 10.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 9.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 8.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 24.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 5.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 8.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

2.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.5
Samples: 149

Max RPKM: 4.8
Min RPKM: 0.1
Std RPKM: 0.5
Median RPKM: 0.4
GTEX-WQUQ-2626-SM-4MVNP 4.8
GTEX-XBED-1726-SM-47JYO 2.6
GTEX-11PRG-2026-SM-5GU5F 2.4
GTEX-ZAB4-2426-SM-5HL8A 2.4
GTEX-13X6I-2726-SM-5Q5ET 2.1
GTEX-14C39-1626-SM-5S2P4 1.5
GTEX-YJ8A-1726-SM-5P9IQ 1.5
GTEX-WI4N-2226-SM-4OOS9 1.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 4.0
Samples: 196

Max RPKM: 39.6
Min RPKM: 0.2
Std RPKM: 3.9
Median RPKM: 3.4
GTEX-117YW-1826-SM-5PNY5 39.6
GTEX-13OVJ-1726-SM-5IJDZ 17.0
GTEX-ZVP2-1526-SM-5NQ82 16.1
GTEX-PWOO-1326-SM-48TCJ 12.3
GTEX-UPIC-1726-SM-4IHKG 11.1
GTEX-12KS4-2426-SM-5LU8P 10.9
GTEX-Q2AH-1226-SM-48TZL 10.8
GTEX-XBED-1526-SM-4AT5W 10.5
Show all